ZFIN ID: ZDB-GENE-131121-510
Gene Name: si:dkey-43p13.5
Gene Symbol: si:dkey-43p13.5
Sequence Ontology ID : SO:0000704

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Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have sequence-specific DNA binding activity; predicted to be involved in multicellular organism development and regulation of transcription, DNA-templated; predicted to localize to the  ...

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa33291 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:dkey-43p13.5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:dkey-43p13.5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR003654 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS50071 (1)
  • PROSITE:PS50803 (1)
  • Pfam:PF00046 (1)
  • Pfam:PF03826 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA si:dkey-43p13.5-201 (1) 1107
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM si:dkey-43p13.5 No data available
    MARKER RELATIONSHIPS
    si:dkey-43p13.5Contained in: [BAC] DKEY-43P13 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_002661221 (1)
    Genomic GenBank:BX908797 (1) 222385bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q6NW67 (1) 271aa
    Sequence Clusters UniGene:87071 (1)
    Sequence Information (all 9)
    OTHER si:dkey-43p13.5 GENE PAGES
  • Alliance (1)
  • Gene:407678 (1)
  • VEGA:OTTDARG00000035084 (1)
  • Ensembl(GRCz11):ENSDARG00000104199 (1)
  • ORTHOLOGY for si:dkey-43p13.5 (Chr: 3)
    CITATIONS (12)