ZFIN ID: ZDB-GENE-120813-3
Gene Name: EF-hand and coiled-coil domain containing 1
Gene Symbol: efcc1    Nomenclature History

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Previous Names: ccdc48, si:dkey-57n24.4

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Predicted to localize to cytosol. Is expressed in neuromast. Orthologous to human EFCC1 (EF-hand and coiled-coil domain containing 1).
Genome Resources: Alliance (1),  Gene:100333996 (1),  Ensembl(GRCz11):ENSDARG00000077826 (2)
GENE EXPRESSION
All Expression Data: Fig. 2 from Jiang et al., 2014
Wild-type Stages, Structures: Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH efcc1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH efcc1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component cytosol (more)
Molecular Function calcium ion binding (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA efcc1-201 (1)    Ensembl 2450
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM efcc1 No data available
MARKER RELATIONSHIPS
efcc1 Contained in: [BAC] DKEY-57N24 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:XM_002663789 (1)
Genomic GenBank:CU467888 (1) 168058 nt
Select Tool
Polypeptide UniProtKB:A0A0R4IP47 (1) 641 aa
Sequence Information (all 8)
ORTHOLOGY for efcc1 ( Chr: 11 )
CITATIONS (14)