ZFIN ID: ZDB-GENE-120411-14
Gene Name: plakophilin 4
Gene Symbol: pkp4    Nomenclature History

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Previous Name: unm_sa1487

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have cadherin binding activity. Predicted to be involved in cell-cell adhesion and cell-cell junction assembly. Predicted to localize to several cellular components, including adherens junction; nucleus; and plasma membrane. Orthologous to human PKP4 (plakophilin 4).
Genome Resources: Alliance (1),  Gene:561566 (1),  Ensembl(GRCz11):ENSDARG00000045331 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1487 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11665 Point Mutation Unknown Premature Stop ENU
    sa40649 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pkp4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pkp4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell adhesion (more)
    Cellular Component adherens junction (more)
    Molecular Function cadherin binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pkp4-201 (1)    Ensembl 5604
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pkp4 No data available
    MARKER RELATIONSHIPS
    pkp4 Contained in: [BAC] DKEY-23D7 (1) (order this), DKEY-276J7 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_684979 (1) 4739 nt
    Genomic GenBank:BX005272 (1) 215838 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8QAD2 (1) 1136 aa
    Sequence Information (all 18)
    ORTHOLOGY for pkp4 ( Chr: 6 )
    CITATIONS (19)