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ZIRC
ZFIN ID: ZDB-GENE-110623-6
Gene Name: CLN6 transmembrane ER protein b
Gene Symbol: cln6b
Sequence Ontology ID : SO:0001217

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in lysosome organization. Predicted to localize to the endoplasmic reticulum. Human ortholog(s) of this gene implicated in neuronal ceroid lipofuscinosis; neuronal ceroid  ...
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37974 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cln6b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    neuronal ceroid lipofuscinosis 4A Ceroid lipofuscinosis, neuronal, Kufs type, adult onset 204300
    neuronal ceroid lipofuscinosis 6 Ceroid lipofuscinosis, neuronal, 6 601780
    DISEASE ASSOCIATED WITH cln6b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process lysosome organization (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR029255 (1)
  • Pfam:PF15156 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cln6b-201 (1) 1323
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cln6b No data available
    MARKER RELATIONSHIPS
    cln6b Contained in: [BAC] CH211-139F22 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_017354110 (1)
    Genomic GenBank:CU183952 (1) 173283 bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8RWM5 (1) 310 aa
    Sequence Information (all 8)
    ORTHOLOGY for cln6b ( Chr: 25 )
    CITATIONS (11)