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General Information
ZIRC
ZFIN ID: ZDB-GENE-101001-1
Gene Name: collagen, type IV, alpha 4
Gene Symbol: col4a4
Sequence Ontology ID : SO:0001217

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Location: Chr: 15 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have extracellular matrix structural constituent and heparin binding activity. Predicted to be involved in cell adhesion and collagen fibril organization. Predicted to localize to the  ...
GENE EXPRESSION
All Expression Data: Fig. T2 from Li et al., 2011
Wild-type Stages, Structures: Larval:Day 6 (144.0h-168.0h) to Adult (90d-730d, breeding adult)
 
PHENOTYPE No data available
DISEASE ASSOCIATED WITH col4a4 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
autosomal recessive Alport syndrome Alport syndrome 2, autosomal recessive 203780
benign familial hematuria Hematuria, familial benign 141200
DISEASE ASSOCIATED WITH col4a4 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process extracellular matrix organization (more)
Cellular Component collagen trimer (more)
Molecular Function extracellular matrix structural constituent (more)
GO Terms (all 5)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA col4a4-201 (1) 10607
GENE PRODUCT DESCRIPTION No description available
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM col4a4 No data available
MARKER RELATIONSHIPS
col4a4 Contained in: [BAC] CH73-74H18 (1) (order this), DKEY-29L4 (1) (order this), DKEYP-110B2 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:XM_009291835 (1)
Genomic GenBank:BX571880 (1) 194220 bp
Select Tool
Polypeptide UniProtKB:X1WFR7 (1) 1670 aa
Sequence Clusters UniGene:128096 (1)
Sequence Information (all 13)
ORTHOLOGY for col4a4 ( Chr: 15 )
CITATIONS (22)