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ZIRC
ZFIN ID: ZDB-GENE-100910-5
Gene Name: AF4/FMR2 family, member 4
Gene Symbol: aff4
Sequence Ontology ID : SO:0001217

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity and double-stranded DNA binding activity. Predicted to localize to the ELL-EAF complex. Orthologous to human AFF4 (AF4/FMR2 family member  ...
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10553 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH aff4 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    CHOPS syndrome 616368
    DISEASE ASSOCIATED WITH aff4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component ELL-EAF complex (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007797 (1)
  • Pfam:PF05110 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA aff4-003 (1) 381
    mRNA aff4-202 (1) 524
    aff4-203 (1) 3441
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM aff4 No data available
    MARKER RELATIONSHIPS
    aff4 Contained in: [BAC] CH73-266I14 (1) (order this)
    [Fosmid] CH1073-325K8 (1) (order this), CH1073-492N22 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005173899 (1) 4999 bp
    Genomic GenBank:FP085421 (1) 46282 bp
    Select Tool
    Polypeptide UniProtKB:I3ISK1 (1) 1083 aa
    Sequence Clusters UniGene:156139 (1)
    Sequence Information (all 18)
    ORTHOLOGY for aff4 ( Chr: 21 )
    CITATIONS (12)