ZFIN ID: ZDB-GENE-100405-4
Gene Name: WD repeat containing planar cell polarity effector
Gene Symbol: wdpcp    Nomenclature History

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Previous Names: fri (1), fritz (1), gb:eb913274, si:dkeyp-74f1.3

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to be involved in establishment of protein localization. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome 15 and congenital heart defects, hamartomas of tongue, and polysyndactyly. Orthologous to human WDPCP (WD repeat containing planar cell polarity effector).
Genome Resources: Alliance (1),  Gene:100333125 (1),  Ensembl(GRCz11):ENSDARG00000074590 (2)
GENE EXPRESSION
All Expression Data: Fig. 7-S3 from Collins et al., 2018
Wild-type Stages, Structures: Gastrula:75%-epiboly (8.0h-9.0h) to Gastrula:75%-epiboly (8.0h-9.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fh348 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • fh349 Point Mutation Unknown Unknown ENU
    j101e1 Unknown Unknown Unknown
    sa13922 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23077 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39162 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • wdpcp_unrecovered Point Mutation Unknown Unknown ENU
    DISEASE ASSOCIATED WITH wdpcp HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Bardet-Biedl syndrome 15 Alliance ?Bardet-Biedl syndrome 15 615992
    congenital heart defects, hamartomas of tongue, and polysyndactyly Alliance ?Congenital heart defects, hamartomas of tongue, and polysyndactyly 217085
    DISEASE ASSOCIATED WITH wdpcp VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process establishment of protein localization (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA wdpcp-201 (1)    Ensembl 2977
    wdpcp-202 (1)    Ensembl 833
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM wdpcp No data available
    MARKER RELATIONSHIPS
    wdpcp Contained in: [BAC] CH211-207O18 (1), DKEYP-74F1 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_005158535 (1)
    Genomic GenBank:BX649529 (1) 216647 nt Blast at MegaBLAST
    Polypeptide UniProtKB:E7F9Q9 (1) 707 aa
    Sequence Information (all 10)
    ORTHOLOGY for wdpcp ( Chr: 17 )
    CITATIONS (21)