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General Information
ZIRC
ZFIN ID: ZDB-GENE-100119-1
Gene Name: collagen, type XXVII, alpha 1a
Gene Symbol: col27a1a
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: cb221 (1), sb:cb221

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(Including Attributions)
Location: Unmapped
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have extracellular matrix structural constituent. Involved in bone mineralization; notochord morphogenesis; and skeletal system development. Predicted to localize to the extracellular  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la019844Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la019845Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la027783Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH col27a1a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Steel syndrome 615155
    DISEASE ASSOCIATED WITH col27a1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process bone mineralization (more)
    Cellular Component collagen trimer (more)
    Molecular Function extracellular matrix structural constituent (more)
    GO Terms (all 11)
    TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM col27a1a No data available
    MARKER RELATIONSHIPS
    col27a1a Encodes: [EST] cb221 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001163294 (1) 5352 bp
    Genomic RefSeq:NW_008805444 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:C7DZK3 (1) 1783 aa
    Sequence Clusters UniGene:134171 (1)
    Sequence Information (all 11)
    OTHER col27a1a GENE PAGES
  • Alliance (1)
  • Gene:100004688 (1)
  • ORTHOLOGY for col27a1a ( Unmapped )
    CITATIONS (23)