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ZIRC
ZFIN ID: ZDB-GENE-091118-27
Gene Name: whirlin a
Gene Symbol: whrna
Sequence Ontology ID : SO:0000704

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Previous Names: dfnb31 (1), dfnb31a (1), si:ch73-272g3.1

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in sensory perception of sound; predicted to colocalize with the photoreceptor connecting cilium and photoreceptor inner segment; orthologous to human WHRN (whirlin).
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fh340 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la013975Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10839 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23889 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa29545 Point Mutation Unknown Splice Site ENU
    sa29546 Point Mutation Unknown Premature Stop ENU
    whrna_unrecovered Point Mutation Unknown Unknown ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH whrna HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    autosomal recessive nonsyndromic deafness 31 Deafness, autosomal recessive 31 607084
    Usher syndrome type 2D Usher syndrome, type 2D 611383
    DISEASE ASSOCIATED WITH whrna VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process sensory perception of light stimulus (more)
    GO Terms (all 2)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA whrna-202 (1) 3469
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM whrna
    MARKER RELATIONSHIPS
    whrnaContained in: [BAC] CH73-50A21 (1) (order this), CH73-272G3 (1) (order this), CH211-181B18 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    Genomic GenBank:CR376852 (1) 157717bp
    Select Tool
    Polypeptide UniProtKB:E7F2D8 (1) 939aa
    Sequence Information (all 5)
    ORTHOLOGY for whrna (Chr: 21)
    CITATIONS (19)