ZFIN ID: ZDB-GENE-090827-2
Gene Name: collagen, type XXII, alpha 1
Gene Symbol: col22a1    Nomenclature History

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Previous Names: col9a1 (1), prp

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Unmapped
Description: Involved in several processes, including embryonic caudal fin morphogenesis; fin regeneration; and muscle attachment. Predicted to localize to collagen trimer. Is expressed in several structures, including head; heart; inner ear; myotome; and pectoral fin.
Genome Resources: Alliance (1),  Gene:100317029 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ci16 Small Deletion Unknown Frameshift, Premature Stop TALEN
j131 Point Mutation Unknown Unknown ENU
sa19381 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24791 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa30457 Point Mutation Unknown Splice Site ENU
    sa30458 Point Mutation Unknown Splice Site ENU
    sa30459 Point Mutation Unknown Premature Stop ENU
    sa38193 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44408 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45027 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-col22a1 N/A 1
    MO2-col22a1 N/A 1
    MO3-col22a1 N/A 1
    TALEN1-col22a1 1
    DISEASE ASSOCIATED WITH col22a1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH col22a1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process muscle attachment (more)
    Cellular Component collagen trimer (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS No data available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Name Type Isotype Host Organism Assay Source Publications
    Ab1-col22a1 polyclonal Rabbit IHC, WB 2
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM col22a1 No data available
    MARKER RELATIONSHIPS No data available
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001291376 (1)
    Genomic GenBank:CABZ01074133 (1) 23877 nt
    Polypeptide UniProtKB:A0A0R4IR54 (1) 1622 aa
    Sequence Information (all 17)
    ORTHOLOGY for col22a1 ( Unmapped )
    CITATIONS (16)