ZFIN ID: ZDB-GENE-090708-3
Gene Name: solute carrier family 1 (glial high affinity glutamate transporter), member 3b
Gene Symbol: slc1a3b
Previous Names: EAAT1B (1), glastb (1), si:dkey-21n12.2
Location: Chr: 10   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 4 figures from 4 publications
Wild-type Stages, Structures: Larval:Protruding-mouth (72.0h-96.0h, 3.5mm) to Adult (90d-730d, breeding adult)
  cerebellum, lateral line system neuromast, molecular layer corpus cerebelli Bergmann glial cell, molecular layer valvula cerebelli Bergmann glial cell (all 7) expand
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE
Phenotype of Human Orthologue OMIM Phenotype ID
Episodic ataxia, type 6 612656
GENE ONTOLOGY
Ontology GO Term
Biological Process dicarboxylic acid transport (more)
Cellular Component membrane (more)
Molecular Function sodium:dicarboxylate symporter activity (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001991 (1)
  • InterPro:IPR018107 (1)
  • PROSITE:PS00713 (1)
  • PROSITE:PS00714 (1)
  • Pfam:PF00375 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slc1a3b-001 (1) 1724
    GENE PRODUCT DESCRIPTION No description available
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc1a3b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    slc1a3b Contained in: [BAC] DKEY-21N12 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001190303 (1) 1630 bp
    Genomic GenBank:AL929053 (1) 142345 bp
    Select Tool
    Polypeptide UniProtKB:D7RVS0 (1) 537 aa
    Sequence Clusters UniGene:159156 (1)
    Sequence Information (all 11)
    OTHER slc1a3b GENE PAGES
  • Gene:556181 (1)
  • VEGA:OTTDARG00000031188 (1)
  • Ensembl(Zv9):ENSDARG00000043148 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish slc1a3b 10  
    Human SLC1A3 5 (5p13)
  • OMIM:600111
  • Gene:6507
  • Mouse Slc1a3 15 ( 3.82 cM)
  • MGI:99917
  • Gene:20512
  • Orthology Details
    CITATIONS (12)