ZFIN ID: ZDB-GENE-090708-3
Gene Name: solute carrier family 1 (glial high affinity glutamate transporter), member 3b
Gene Symbol: slc1a3b
Previous Names: EAAT1B (1), glastb (1), si:dkey-21n12.2
Location: Chr: 10 Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 4 figures from 4 publications
Wild-type Stages, Structures: Larval:Protruding-mouth (72.0h-96.0h, 3.5mm) to Adult (90d-730d, breeding adult)
  cerebellum, lateral line system neuromast, molecular layer corpus cerebelli Bergmann glial cell, molecular layer valvula cerebelli Bergmann glial cell (all 7) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH slc1a3b HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
episodic ataxia type 6 Episodic ataxia, type 6 612656
GENE ONTOLOGY
Ontology GO Term
Biological Process dicarboxylic acid transport (more)
Cellular Component integral component of membrane (more)
Molecular Function sodium:dicarboxylate symporter activity (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001991 (1)
  • InterPro:IPR018107 (1)
  • PROSITE:PS00713 (1)
  • PROSITE:PS00714 (1)
  • Pfam:PF00375 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slc1a3b-001 (1) 1724
    GENE PRODUCT DESCRIPTION
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM slc1a3b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    slc1a3bContained in: [BAC] DKEY-21N12 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001190303 (1) 1630bp
    Genomic GenBank:AL929053 (1) 142345bp
    Select Tool
    Polypeptide UniProtKB:D7RVS0 (1) 537aa
    Sequence Clusters UniGene:159156 (1)
    Sequence Information (all 11)
    OTHER slc1a3b GENE PAGES
  • Gene:556181 (1)
  • VEGA:OTTDARG00000031188 (1)
  • Ensembl(GRCz10):ENSDARG00000043148 (1)
  • ORTHOLOGY for slc1a3b (Chr: 10)
    Species Symbol Chromosome Accession # Evidence
    Human SLC1A3 5
  • Gene:6507
  • OMIM:600111
  • HGNC:10941
  • Amino acid sequence comparison (3)
    Conserved genome location (synteny) (1)
    Mouse Slc1a3 15
  • MGI:99917
  • Gene:20512
  • Amino acid sequence comparison (3)
    Download Curated Orthology
    CITATIONS (13)