ZFIN ID: ZDB-GENE-090708-3
Gene Name: solute carrier family 1 member 3b
Gene Symbol: slc1a3b    Nomenclature History

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Previous Names: EAAT1B (1), glastb (1), si:dkey-21n12.2

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 10 Mapping Details/Browsers
Description: Predicted to have symporter activity. Predicted to localize to integral component of membrane. Is expressed in nervous system. Human ortholog(s) of this gene implicated in episodic ataxia type 6. Orthologous to human SLC1A3 (solute carrier family 1 member 3).
Genome Resources: Alliance (1),  Gene:556181 (1),  Ensembl(GRCz11):ENSDARG00000043148 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa34953 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc1a3b HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    episodic ataxia type 6 Alliance Episodic ataxia, type 6 612656
    DISEASE ASSOCIATED WITH slc1a3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    Molecular Function symporter activity (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA slc1a3b-202 (1)    Ensembl 1724
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc1a3b No data available
    MARKER RELATIONSHIPS
    slc1a3b Contained in: [BAC] DKEY-21N12 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001190303 (1) 1630 nt
    Genomic GenBank:AL929053 (1) 142345 nt
    Select Tool
    Polypeptide UniProtKB:D7RVS0 (1) 537 aa
    Sequence Information (all 13)
    ORTHOLOGY for slc1a3b ( Chr: 10 )
    CITATIONS (22)