ZFIN ID: ZDB-GENE-081104-437
Gene Name: ATP/GTP binding protein-like 4
Gene Symbol: agbl4    Nomenclature History

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Previous Names: CCP6 (1), si:dkey-7o6.7, wu:fj47c02, zgc:112522

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Is expressed in Kupffer's vesicle; eye; otic vesicle; peripheral olfactory organ; and pronephros. Orthologous to human AGBL4 (ATP/GTP binding protein like 4).
Genome Resources: Alliance (1),  Gene:550450 (1), 
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Cleavage:64-cell (2.0h-2.25h) to Larval:Days 7-13 (168.0h-14d, 4.5mm, 8 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026358Tg Transgenic Insertion Unknown Unknown DNA
la029429Tg Transgenic Insertion Unknown Unknown DNA
sa12099 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21233 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34357 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41158 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-agbl4 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH agbl4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH agbl4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR040626 Cytosolic carboxypeptidase, N-terminal
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    aberrant processed transcript agbl4-201 (1)    Ensembl 522
    mRNA agbl4-202 (1)    Ensembl 1010
    Browsers: NCBI
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM agbl4 No data available
    MARKER RELATIONSHIPS
    agbl4 Contained in: [BAC] CH73-170L9 (1), CH73-311L5 (1), CH73-319G13 (1), CH211-221E5 (1), DKEY-7O6 (1) (order this), DKEY-50D16 (1) (order this), DKEYP-21D8 (1)
    [Fosmid] CH1073-433O16 (1)
    agbl4 Encodes: [EST] fj47c02
    [cDNA] MGC:112522 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017754 (1) 1015 bp
    Genomic GenBank:BX005425 (1) 252440 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1Q6A7 (1) 225 aa
    Sequence Information (all 28)
    ORTHOLOGY for agbl4 ( Chr: 8 )
    CITATIONS (20)