header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-081104-178
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.
Gene Name: si:ch211-218o21.4
Gene Symbol: si:ch211-218o21.4    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name:

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Orthologous to human FAM107A (family with sequence similarity 107 member A).
Genome Resources: Alliance (1),  Ensembl(GRCz11):ENSDARG00000079869 (2)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa7146 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:ch211-218o21.4 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:ch211-218o21.4 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY No data available
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR009533 (1)
  • Pfam:PF06625 (1)
    • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:ch211-218o21.4-202 (1)    Ensembl 1189
    Select Tool
    Browsers: NCBI,  Ensembl,  ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-218o21.4 No data available
    MARKER RELATIONSHIPS
    si:ch211-218o21.4 Contained in: [BAC] CH211-218O21 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    Genomic GenBank:BX537348 (1) 207282 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F6NSF0 (1) 188 aa
    Select Tool
    Sequence Information (all 3)
    ORTHOLOGY for si:ch211-218o21.4 ( Chr: 8 )
    CITATIONS (8)