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ZIRC
ZFIN ID: ZDB-GENE-080709-5
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Gene Name: PABPN1 like, cytoplasmic
Gene Symbol: pabpn1l    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Orthologous to human PABPN1L (PABPN1 like, cytoplasmic).
Genome Resources: Alliance (1),  Gene:796580 (1),  Ensembl(GRCz11):ENSDARG00000087996 (1)
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa41038 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pabpn1l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pabpn1l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function nucleic acid binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000504 (1)
  • InterPro:IPR012677 (1)
  • InterPro:IPR035979 (1)
  • PROSITE:PS50102 (1)
  • Pfam:PF00076 (1)
    • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pabpn1l-201 (1)    Ensembl 927
    Select Tool
    pabpn1l-202 (1)    Ensembl 648
    Select Tool
    pabpn1l-203 (1)    Ensembl 652
    Select Tool
    Browsers: UCSC,  NCBI,  Ensembl,  ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pabpn1l No data available
    MARKER RELATIONSHIPS
    pabpn1l Contained in: [BAC] CH211-168O15 (1) (order this), CH211-230K7 (1) (order this)
    pabpn1l Has Artifact: [cDNA] MGC:92577 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001327845 (1)
    Select Tool
    Genomic GenBank:CR354423 (1) 132329 bp
    Select Tool
    Polypeptide UniProtKB:E9QGY6 (1) 192 aa
    Select Tool
    Sequence Clusters UniGene:108191 (1)
    Sequence Information (all 17)
    ORTHOLOGY for pabpn1l ( Chr: 7 )
    CITATIONS (14)