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ZIRC
ZFIN ID: ZDB-GENE-080425-4
Gene Name: chondroitin sulfate proteoglycan 5a
Gene Symbol: cspg5a
Sequence Ontology ID : SO:0000704

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Previous Name: cspg5

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to localize to the integral component of membrane. Orthologous to human CSPG5 (chondroitin sulfate proteoglycan 5).
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa22925 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cspg5a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cspg5a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR009505 (1)
  • InterPro:IPR042382 (1)
  • Pfam:PF06567 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA cspg5a-002 (1) 1370
    mRNA cspg5a-202 (1) 2265
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cspg5a No data available
    MARKER RELATIONSHIPS
    cspg5aContained in: [BAC] CH73-68F8 (order this), CH211-215K15 (1) (order this), DKEYP-75E9 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005158277 (1)
    Genomic GenBank:CR391962 (1) 144859bp
    Select Tool
    Polypeptide UniProtKB:F8W3W2 (1) 532aa
    Sequence Clusters UniGene:43670 (1)
    Sequence Information (all 35)
    ORTHOLOGY for cspg5a (Chr: 16)
    CITATIONS (14)