Gene
slitrk2
- ID
- ZDB-GENE-080327-7
- Name
- SLIT and NTRK-like family, member 2
- Symbol
- slitrk2 Nomenclature History
- Previous Names
-
- sc:d0319 (1)
- wu:fj38g04
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Description
- Predicted to be involved in axonogenesis. Predicted to localize to integral component of membrane. Is expressed in central nervous system; neuroepithelial cell; and retinal neural layer. Orthologous to human SLITRK2 (SLIT and NTRK like family member 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 14 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
-
- GEO (1) Expression Atlas (1) UCSC scRNA-seq (1)
- Thisse Expression Data
-
- cssl:d0319 (16 images)
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Charlton-Perkins et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000372 | Leucine-rich repeat N-terminal domain |
| Domain | IPR000483 | Cysteine-rich flanking region, C-terminal |
| Family | IPR043326 | Slitrk family |
| Homologous_superfamily | IPR032675 | Leucine-rich repeat domain superfamily |
| Repeat | IPR001611 | Leucine-rich repeat |
| Repeat | IPR003591 | Leucine-rich repeat, typical subtype |
Domain Details Per Protein
| Protein | Length | Cysteine-rich flanking region, C-terminal | Leucine-rich repeat | Leucine-rich repeat domain superfamily | Leucine-rich repeat N-terminal domain | Leucine-rich repeat, typical subtype | Slitrk family |
|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A2R8RWE2
|
848 | ||||||
|
UniProtKB:F1QE14
|
854 | ||||||
|
UniProtKB:A8BAV3
|
622 |
| Type | Name | Length (nt) | Analysis |
|---|---|---|---|
| mRNA |
slitrk2-201
(1)
|
3032 nt |
Interactions and Pathways
No data available
Plasmids
No data available