ZFIN ID: ZDB-GENE-080327-7 |
Gene Name: | SLIT and NTRK-like family, member 2 | ||||||
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Gene Symbol: | slitrk2 Nomenclature History | ||||||
Previous Names: | sc:d0319 (1), wu:fj38g04 | ||||||
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Gene Type: | protein_coding_gene | ||||||
Location: | Chr: 14 Mapping Details/Browsers | ||||||
Description: | Predicted to be involved in axonogenesis. Predicted to localize to the integral component of membrane. Is expressed in central nervous system; neuroepithelial cell; and retinal neural layer. Orthologous to human SLITRK2 (SLIT and NTRK like family member 2). | ||||||
Genome Resources: | Alliance (1), Gene:794165 (1), Ensembl(GRCz11):ENSDARG00000006636 (2) |
All Expression Data: | 14 figures from 2 publications |
Directly Submitted Expression Data: | 7 figures (16 images) from Thisse et al., 2008 [cssl:d0319] |
Wild-type Stages, Structures: | Segmentation:20-25 somites (19.0h-22.0h) to Adult (90d-730d, breeding adult) |
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Curated Microarray Expression: | GEO (1) |
Allele | Type | Localization | Consequence | Mutagen | Suppliers |
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sa11011 | Point Mutation | Unknown | Premature Stop | ENU |
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sa15552 | Point Mutation | Unknown | Premature Stop | ENU |
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sa19079 | Point Mutation | Unknown | Premature Stop | ENU |
Targeting Reagent | Created Alleles | Publications |
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CRISPR1-slitrk2 |
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1 |
CRISPR2-slitrk2 |
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1 |
Ontology | GO Term |
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Biological Process | axonogenesis (more) |
Cellular Component | integral component of membrane (more) |
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Type | Name | Length (nt) | Analysis | |
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mRNA |
slitrk2-201
(1)
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3032 |
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Browsers: NCBI, Ensembl, ZFIN |
slitrk2 Contained in: | [BAC] CH211-184I23 (1) (order this) |
slitrk2 Encodes: | [EST] cssl:d0319 (1) (order this), fj38g04 |
Type | Accession # | Length (bp/aa) | Analysis |
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RNA | RefSeq:XM_001332731 (1) | 3479 bp |
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Genomic | GenBank:CR762422 (1) | 151177 bp | |
Polypeptide | UniProtKB:F1QE14 (1) | 854 aa |
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Sequence Clusters | UniGene:139401 (1) |