ZFIN Gene: acsm3

ZFIN ID: ZDB-GENE-080220-22

ZFIN ID: ZDB-GENE-080220-22

Gene Name:

acyl-CoA synthetase medium chain family member 3

Gene Symbol:

acsm3 Nomenclature History

Previous Name:

zgc:172040

Gene Type:

protein_coding_gene

Location:

Chr: 2 Mapping Details/Browsers

Description:

Predicted to have acyl-CoA ligase activity; fatty acid ligase activity; and fatty-acyl-CoA synthase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid biosynthetic process. Predicted to localize to mitochondrial matrix. Human ortholog(s) of this gene implicated in IgA glomerulonephritis. Orthologous to several human genes including ACSM3 (acyl-CoA synthetase medium chain family member 3).

Genome Resources:

Alliance (1), Gene:100002035 (1), Ensembl(GRCz11):ENSDARG00000004880 (2)

GENE EXPRESSION No data available

MUTATIONS AND SEQUENCE TARGETING REAGENTS

Allele	Type	Localization	Consequence	Mutagen	Suppliers
sa9805	Point Mutation	Unknown	Splice Site	ENU	European Zebrafish Resource Center (EZRC) (order this) Zebrafish International Resource Center (ZIRC) (order this)
sa11987	Point Mutation	Unknown	Splice Site	ENU	European Zebrafish Resource Center (EZRC) (order this) Zebrafish International Resource Center (ZIRC) (order this)

PHENOTYPE No data available

DISEASE ASSOCIATED WITH acsm3 HUMAN ORTHOLOG

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		{?Hypertension, essential}

DISEASE ASSOCIATED WITH acsm3 VIA EXPERIMENTAL MODELS No data available

GENE ONTOLOGY

Ontology	GO Term
Biological Process	acyl-CoA metabolic process (more)
Cellular Component	mitochondrial matrix (more)
Molecular Function	catalytic activity (more)

GO Terms (all 7)

PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available

TRANSCRIPTS
Type	Name	Length (nt)	Analysis
mRNA	acsm3-201 (1)	3790	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Browsers: UCSC, NCBI, Ensembl, ZFIN

INTERACTIONS AND PATHWAYS

ANTIBODIES No data available

PLASMIDS No data available

CONSTRUCTS WITH SEQUENCES FROM acsm3 No data available

MARKER RELATIONSHIPS

acsm3 Contained in:	[BAC] CH73-60L17 (1)
acsm3 Encodes:	[cDNA] MGC:172040 (1), MGC:198271 (1)

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001111236 (1)	3820 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:CU467875 (1)	97856 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:A9JRA7 (1)	591 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast

Sequence Information (all 15)

ORTHOLOGY for acsm3 ( Chr: 2 )

CITATIONS (16)

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