Gene

focad

ID

ZDB-GENE-080213-1

Name

focadhesin

Symbol

focad Nomenclature History

Previous Names

gb:ct717615

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Orthologous to human FOCAD (focadhesin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Moreno Traspas et al., 2022

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 2 figures from Moreno Traspas et al., 2022
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With focad Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		Liver disease, severe congenital	619991

Associated With focad Via Experimental Models

Human Disease	Fish	Conditions	Citations
liver cirrhosis	focad^imb6/imb6 (AB)	standard conditions	Moreno Traspas et al., 2022

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR022542	Focadhesin/RST, DUF3730
Family	IPR021392	Focadhesin
Family	IPR045163	Focadhesin/RST1
Homologous_superfamily	IPR016024	Armadillo-type fold

Domain Details Per Protein

Protein	Length	Armadillo-type fold	Focadhesin	Focadhesin/RST1	Focadhesin/RST, DUF3730
UniProtKB:E7FGT5 InterPro	1806

Transcripts

Genome Browsers

Type	Name	Length (nt)	Analysis
mRNA	focad-201 (1) Ensembl	5811 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000063356 (1) Ensembl	544 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab1-focad	polyclonal	focad		Rabbit	WB		1

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations