ZFIN Gene: focad

ZFIN ID: ZDB-GENE-080213-1

ZFIN ID: ZDB-GENE-080213-1

Gene Name:

focadhesin

Gene Symbol:

focad Nomenclature History

Previous Name:

gb:ct717615

Gene Type:

protein_coding_gene

Location:

Description:

Orthologous to human FOCAD (focadhesin).

Genome Resources:

Alliance (1), Gene:100150998 (1), Ensembl(GRCz11):ENSDARG00000022020 (2)

GENE EXPRESSION No data available

MUTATIONS AND SEQUENCE TARGETING REAGENTS

Allele	Type	Localization	Consequence	Mutagen	Suppliers
sa10081	Point Mutation	Unknown	Splice Site	ENU	European Zebrafish Resource Center (EZRC) (order this) Zebrafish International Resource Center (ZIRC) (order this)
sa18867	Point Mutation	Unknown	Premature Stop	ENU
sa20893	Point Mutation	Unknown	Splice Site	ENU	Zebrafish International Resource Center (ZIRC) (order this)
sa26920	Point Mutation	Unknown	Splice Site	ENU
sa34032	Point Mutation	Unknown	Splice Site	ENU	Zebrafish International Resource Center (ZIRC) (order this)
sa34033	Point Mutation	Unknown	Premature Stop	ENU	Zebrafish International Resource Center (ZIRC) (order this)
sa40858	Point Mutation	Unknown	Splice Site	ENU	Zebrafish International Resource Center (ZIRC) (order this)
sa40859	Point Mutation	Unknown	Premature Stop	ENU	Zebrafish International Resource Center (ZIRC) (order this)

PHENOTYPE No data available

DISEASE ASSOCIATED WITH focad HUMAN ORTHOLOG No data available

DISEASE ASSOCIATED WITH focad VIA EXPERIMENTAL MODELS No data available

GENE ONTOLOGY No data available

PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available

TRANSCRIPTS
Type	Name	Length (nt)	Analysis
mRNA	focad-201 (1)	5811	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000063356 (1)	544	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Browsers: NCBI, Ensembl, ZFIN

INTERACTIONS AND PATHWAYS

ANTIBODIES No data available

PLASMIDS No data available

CONSTRUCTS WITH SEQUENCES FROM focad No data available

MARKER RELATIONSHIPS

focad Contained in:

[BAC] CH73-41H24 (1), CH73-53M19 (1), CH211-13I24 (1)

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:XM_009303090 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:CU914308 (1)	79297 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:E7FGT5 (1)	1806 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast

ORTHOLOGY for focad ( Chr: 7 )

CITATIONS (11)