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ZIRC
ZFIN ID: ZDB-GENE-080213-1
Gene Name: focadhesin
Gene Symbol: focad    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Orthologous to human FOCAD (focadhesin).
Genome Resources: Alliance (1),  Gene:100150998 (1),  Ensembl(GRCz11):ENSDARG00000022020 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10081 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18867 Point Mutation Unknown Premature Stop ENU
    sa20893 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa26920 Point Mutation Unknown Splice Site ENU
    sa34032 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34033 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40858 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40859 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH focad HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH focad VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR016024 (1)
  • InterPro:IPR021392 (1)
  • InterPro:IPR022542 (1)
  • Pfam:PF11229 (1)
  • Pfam:PF12530 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA focad-201 (1)    Ensembl 5811
    ncRNA ottdart00000063356 (1)    Ensembl 544
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM focad No data available
    MARKER RELATIONSHIPS
    focad Contained in: [BAC] CH73-41H24 (1) (order this), CH73-53M19 (1) (order this), CH211-13I24 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009303090 (1)
    Genomic GenBank:CU914308 (1) 79297 bp
    Select Tool
    Polypeptide UniProtKB:E7FGT5 (1) 1806 aa
    Sequence Clusters UniGene:153509 (1)
    Sequence Information (all 12)
    ORTHOLOGY for focad ( Chr: 7 )
    CITATIONS (10)