ZFIN ID: ZDB-GENE-080204-83
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Gene Name: zgc:171480
Gene Symbol: zgc:171480    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to localize to the mitochondrial large ribosomal subunit. Orthologous to human MRPL55 (mitochondrial ribosomal protein L55).
Genome Resources: Alliance (1),  Gene:564733 (1),  Ensembl(GRCz11):ENSDARG00000043402 (2)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zgc:171480 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zgc:171480 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process translation (more)
Cellular Component mitochondrial large ribosomal subunit (more)
Molecular Function structural constituent of ribosome (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Family IPR018615 Ribosomal protein L55, mitochondrial
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA zgc:171480-201 (1)    Ensembl 863
Select Tool
Browsers: UCSC,  NCBI,  Ensembl,  ZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM zgc:171480 No data available
MARKER RELATIONSHIPS
zgc:171480 Contained in: [BAC] DKEY-7O6 (1) (order this)
zgc:171480 Encodes: [cDNA] MGC:171480 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001111179 (1) 863 bp
Select Tool
Genomic GenBank:BX005425 (1) 252440 bp Blast at MegaBLAST
Polypeptide UniProtKB:A8WHP2 (1) 133 aa
Select Tool
Sequence Information (all 11)
ORTHOLOGY for zgc:171480 ( Chr: 8 )
CITATIONS (13)