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ZIRC
ZFIN ID: ZDB-GENE-080204-123
Gene Name: putative homeodomain transcription factor 1
Gene Symbol: phtf1
Sequence Ontology ID : SO:0001217

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Previous Name: zgc:175264

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to localize to the integral component of membrane. Orthologous to human PHTF1 (putative homeodomain transcription factor 1).
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa676 Point Mutation Unknown Splice Site ENU
sa933 Point Mutation Unknown Premature Stop ENU
sa21883 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21884 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • vu501Gt Transgenic Insertion Unknown Unknown DNA
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH phtf1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH phtf1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component integral component of membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR021980 (1)
  • InterPro:IPR039775 (1)
  • Pfam:PF12129 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zgc:175264-201 (1) 3261
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM phtf1 No data available
    MARKER RELATIONSHIPS
    phtf1 Contained in: [BAC] DKEY-219E24 (1) (order this)
    phtf1 Encodes: [cDNA] MGC:175264 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001114429 (1) 3133 bp
    Genomic GenBank:CU207354 (1) 141089 bp
    Select Tool
    Polypeptide UniProtKB:A9ULS8 (1) 691 aa
    Sequence Clusters UniGene:84071 (1)
    Sequence Information (all 13)
    ORTHOLOGY for phtf1 ( Chr: 11 )
    CITATIONS (15)