ZFIN ID: ZDB-GENE-080102-2
Gene Name: choline O-acetyltransferase a
Gene Symbol: chata
Sequence Ontology ID : SO:0000704

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Previous Names: baj, chat

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
Note: Yokogawa et al. (2007) identified the chat gene with Ensembl ENSDARG00000015854 on Chr. 13.
AUTOMATED DESCRIPTION
Predicted to have choline O-acetyltransferase activity; involved in locomotory behavior; predicted to localize to the cytoplasm and neuron projection; orthologous to human CHAT (choline  ...
GENE EXPRESSION
All Expression Data: 19 figures from 14 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa22323 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31935 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45487 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tf247 Point Mutation Acceptor Splice Site of Intron 2 Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 10 figures from 4 publications
    Observed in:
    DISEASE ASSOCIATED WITH chata HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    congenital myasthenic syndrome 6 Myasthenic syndrome, congenital, 6, presynaptic 254210
    DISEASE ASSOCIATED WITH chata VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process locomotory behavior (more)
    Molecular Function choline O-acetyltransferase activity (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000542 (1)
  • InterPro:IPR039551 (1)
  • PROSITE:PS00439 (1)
  • PROSITE:PS00440 (1)
  • Pfam:PF00755 (1)
  • EC:2.3.1.6 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA chata-202 (1) 2105
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM chata
    MARKER RELATIONSHIPS
    chataContained in: [BAC] CH211-222I16 (order this), CH211-232K3 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001130719 (1) 1914bp
    Genomic GenBank:BX855592 (1) 159646bp
    Select Tool
    Polypeptide UniProtKB:A0A2C9F1G9 (1) 648aa
    Sequence Clusters UniGene:117574 (1)
    Sequence Information (all 19)
    OTHER chata GENE PAGES
  • Alliance (1)
  • Gene:100170938 (1)
  • VEGA:OTTDARG00000035437 (1)
  • Ensembl(GRCz11):ENSDARG00000015854 (2)
  • ORTHOLOGY for chata (Chr: 13)
    CITATIONS (45)