ZFIN ID: ZDB-GENE-071004-60
Gene Name: zgc:173624
Gene Symbol: zgc:173624    Nomenclature History

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Previous Name: si:dkey-262g12.6

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 4 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in female organism. Orthologous to human ZNF530 (zinc finger protein 530); ZNF572 (zinc finger protein 572); and ZKSCAN7 (zinc finger with KRAB and SCAN domains 7).
Genome Resources: Alliance (1),  Gene:794762 (1),  Ensembl(GRCz11):ENSDARG00000096141 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
All Expression Data: Table S1 from Newman et al., 2019
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa26356 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zgc:173624 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zgc:173624 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription by RNA polymerase II (more)
Cellular Component nucleus (more)
Molecular Function metal ion binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA zgc:173624-201 (1)    Ensembl 1336
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM zgc:173624 No data available
MARKER RELATIONSHIPS
zgc:173624 Contained in: [BAC] DKEY-262G12 (1) (order this)
zgc:173624 Encodes: [cDNA] MGC:173624 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001109725 (1) 1361 nt
Genomic GenBank:BX855614 (1) 157594 nt
Select Tool
Polypeptide UniProtKB:A7MCB5 (1) 299 aa
Sequence Information (all 16)
ORTHOLOGY for zgc:173624 ( Chr: 4 )
CITATIONS (15)