ZFIN ID: ZDB-GENE-070912-300
Gene Name: otoconin 90
Gene Symbol: oc90    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: otoc1 (1), si:ch211-66b9.2, wu:fb30b04

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity and phospholipase A2 activity. Involved in otolith development. Predicted to localize to extracellular region. Is expressed in midbrain hindbrain boundary neural rod; nervous system; otic vesicle; pharyngeal arch 3-7 skeleton; and spinal cord neural rod. Orthologous to human OC90 (otoconin 90).
Genome Resources: Alliance (1),  Gene:568941 (1),  Ensembl(GRCz11):ENSDARG00000001721 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa33001 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-oc90 N/A 2
    MO2-oc90 N/A 1
    PHENOTYPE
    Data: 4 figures from Petko et al., 2008
    Observed in:
    DISEASE ASSOCIATED WITH oc90 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH oc90 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process otolith development (more)
    Cellular Component extracellular region (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA oc90-201 (1)    Ensembl 3250
    oc90-202 (1)    Ensembl 574
    oc90-203 (1)    Ensembl 630
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM oc90 No data available
    MARKER RELATIONSHIPS
    oc90 Contained in: [BAC] CH211-66B9 (1)
    oc90 Encodes: [EST] fb30b04
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001080192 (1) 3270 nt
    Genomic GenBank:BX511268 (1) 167067 nt
    Select Tool
    Polypeptide UniProtKB:A0A0B5JS34 (1) 939 aa
    Sequence Information (all 16)
    ORTHOLOGY for oc90 ( Chr: 2 )
    CITATIONS (21)