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ZIRC
ZFIN ID: ZDB-GENE-070912-20
Gene Name: ATPase family AAA domain containing 5a
Gene Symbol: atad5a
Sequence Ontology ID : SO:0001217

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Previous Names: cb14 (1), im:7138471, sb:cb14, si:ch211-11k18.10 (1), wu:fi03a11

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity. Predicted to localize to the nucleus. Is expressed in alar plate midbrain region; nervous system; neural plate; optic vesicle; and somite. Orthologous to human  ...
GENE EXPRESSION
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2001 [cb14]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7138471]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH atad5a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH atad5a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component nucleus (more)
Molecular Function ATP binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003593 (1)
  • InterPro:IPR003959 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF00004 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA atad5a-002 (1) 365
    mRNA atad5a-201 (1) 5970
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atad5a No data available
    MARKER RELATIONSHIPS
    atad5a Contained in: [BAC] CH73-33I10 (1) (order this)
    atad5a Encodes: [EST] cb14 (1) (order this), fi03a11, IMAGE:7138471 (1) (order this)
    [cDNA] MGC:171218 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_003198109 (1)
    Genomic GenBank:FP016144 (1) 105292 bp
    Select Tool
    Polypeptide UniProtKB:E7FE92 (1) 1778 aa
    Sequence Clusters UniGene:160155 (1)
    Sequence Information (all 39)
    ORTHOLOGY for atad5a ( Chr: 3 )
    CITATIONS (24)