ZFIN ID: ZDB-GENE-070911-2
Gene Name: calsyntenin 2
Gene Symbol: clstn2    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: si:dkeyp-55c8.1

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to localize to cell surface and postsynaptic membrane. Is expressed in nervous system. Orthologous to human CLSTN2 (calsyntenin 2).
Genome Resources: Alliance (1),  Gene:100125749 (1),  Ensembl(GRCz11):ENSDARG00000060637 (2)
GENE EXPRESSION
All Expression Data: 4 figures from 2 publications
Wild-type Stages, Structures: Blastula:128-cell (2.25h-2.5h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
High Throughput Expression: Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH clstn2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH clstn2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process homophilic cell adhesion via plasma membrane adhesion molecules (more)
Cellular Component cell junction (more)
Molecular Function calcium ion binding (more)
GO Terms (all 14)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA clstn2-201 (1)    Ensembl 9327
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM clstn2 No data available
MARKER RELATIONSHIPS
clstn2 Contained in: [BAC] CH73-170L17 (1), CH73-303O8 (1), CH73-382G4 (1), CH211-202H10 (1), DKEYP-20F6, DKEYP-55C8, DKEYP-111C12 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001159839 (1) 2814 nt
Genomic RefSeq:NW_018394508 (1) Blast at MegaBLAST
Polypeptide UniProtKB:B0S5G3 (1) 937 aa
Sequence Information (all 21)
ORTHOLOGY for clstn2 ( Chr: 2 )
CITATIONS (18)