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ZIRC
ZFIN ID: ZDB-GENE-070817-2
Gene Name: matrix metallopeptidase 11b
Gene Symbol: mmp11b    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Predicted to have metalloendopeptidase activity. Predicted to be involved in collagen catabolic process and extracellular matrix organization. Predicted to localize to the extracellular space. Orthologous to human MMP11 (matrix metallopeptidase 11).
Genome Resources: Alliance (1),  Gene:565793 (1),  Ensembl(GRCz11):ENSDARG00000016718 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11861 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14306 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23891 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-mmp11b N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH mmp11b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH mmp11b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism development (more)
    Cellular Component extracellular matrix (more)
    Molecular Function hydrolase activity (more)
    GO Terms (all 12)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA mmp11b-201 (1)    Ensembl 1590
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM mmp11b No data available
    MARKER RELATIONSHIPS
    mmp11b Contained in: [BAC] DKEY-152P12 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_689061 (1)
    Genomic GenBank:CR936477 (1) 207540 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1RA45 (1) 529 aa
    Sequence Clusters UniGene:108314 (1)
    Sequence Information (all 15)
    ORTHOLOGY for mmp11b ( Chr: 21 )
    CITATIONS (20)