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ZIRC
ZFIN ID: ZDB-GENE-070803-1
Gene Name: tudor domain containing 1
Gene Symbol: tdrd1
Sequence Ontology ID : SO:0000704

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Previous Name: im:7155161 (1)

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits piRNA binding activity. Involved in P granule organization. Predicted to localize to the pi-body. Orthologous to human TDRD1 (tudor domain containing 1).
GENE EXPRESSION
All Expression Data: 11 figures from 4 publications
Directly Submitted Expression Data: 7 figures (6 images) from Thisse et al., 2004 [IMAGE:7155161]
Wild-type Stages, Structures: Pharyngula:High-pec (42.0h-48.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fh244 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa7364 Point Mutation Unknown Missense ENU
    sa16285 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42057 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tdrd1_unrecovered Point Mutation Unknown Unknown ENU
    Targeting reagents:
    DISEASE ASSOCIATED WITH tdrd1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tdrd1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process P granule organization (more)
    Cellular Component pi-body (more)
    Molecular Function piRNA binding (more)
    GO Terms (all 14)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tdrd1-201 (1) 714
    tdrd1-202 (1) 4166
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tdrd1 No data available
    MARKER RELATIONSHIPS
    tdrd1Contained in: [BAC] CH211-225B10 (1) (order this)
    tdrd1Encodes: [EST] IMAGE:7155161 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001164028 (1) 4167bp
    Genomic GenBank:CR932360 (1) 164973bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QMA4 (1) 1176aa
    Sequence Clusters UniGene:133744 (1)
    Sequence Information (all 18)
    ORTHOLOGY for tdrd1 (Chr: 12)
    CITATIONS (25)