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ZIRC
ZFIN ID: ZDB-GENE-070719-6
Gene Name: ATP/GTP binding protein-like 2
Gene Symbol: agbl2    Nomenclature History

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Previous Names: CCP2 (1), zgc:165648, zte25

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 25 Mapping Details/Browsers
Description: Predicted to have metallocarboxypeptidase activity. Predicted to be involved in protein side chain deglutamylation. Predicted to localize to the centriole; ciliary basal body; and cytosol. Is expressed in brain; otic vesicle; pronephros; and sensory system. Orthologous to human AGBL2 (ATP/GTP binding protein like 2).
Genome Resources: Alliance (1),  Gene:568152 (1),  Ensembl(GRCz11):ENSDARG00000079983 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la023274Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa6806 Point Mutation Unknown Premature Stop ENU
    sa10896 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa13465 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44328 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-agbl2 N/A 2
    MO2-agbl2 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH agbl2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH agbl2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein side chain deglutamylation (more)
    Cellular Component centriole (more)
    Molecular Function metallocarboxypeptidase activity (more)
    GO Terms (all 15)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000834 (1)
  • InterPro:IPR040626 (1)
  • Pfam:PF00246 (1)
  • Pfam:PF18027 (1)
  • EC:3.4.17.- (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA agbl2-202 (1)    Ensembl 842
    agbl2-203 (1)    Ensembl 543
    agbl2-204 (1)    Ensembl 3422
    agbl2-205 (1)    Ensembl 502
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM agbl2 No data available
    MARKER RELATIONSHIPS
    agbl2 Contained in: [BAC] CH211-190O6 (1) (order this)
    agbl2 Encodes: [cDNA] MGC:165648 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001099247 (1) 2923 bp
    Genomic GenBank:CR376836 (1) 132156 bp
    Select Tool
    Polypeptide UniProtKB:F1Q5V6 (1) 1025 aa
    Sequence Clusters UniGene:86454 (1)
    Sequence Information (all 21)
    ORTHOLOGY for agbl2 ( Chr: 25 )
    CITATIONS (23)