| ZFIN ID: ZDB-GENE-070606-1 |
| Gene Name: | tumor necrosis factor (ligand) superfamily, member 10 like 3 | |||||||||||||
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| Gene Symbol: | tnfsf10l3 Nomenclature History |
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Attributions
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| Previous Names: | DL1b (1), TNFSF10-3 (1) | |||||||||||||
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| Gene Type: | protein_coding_gene | |||||||||||||
| Location: | Chr: 21 Mapping Details/Browsers | |||||||||||||
| Description: | Predicted to have metal ion binding activity and tumor necrosis factor receptor binding activity. Predicted to be involved in immune response. Predicted to localize to integral component of membrane. Is expressed in anterior lateral line neuromast; posterior lateral line neuromast; and posterior lateral line primordium. | |||||||||||||
| Genome Resources: | Alliance (1), Gene:562262 (1), Ensembl(GRCz11):ENSDARG00000032746 (2) | |||||||||||||
| All Expression Data: | 3 figures from Eimon et al., 2006 |
| Wild-type Stages, Structures: | Blastula:1k-cell (3.0h-3.33h) to Hatching:Long-pec (48.0h-60.0h) |
| High Throughput Expression: | GEO (1) Expression Atlas (1) |
MUTATIONS AND SEQUENCE TARGETING REAGENTS
| Allele | Type | Localization | Consequence | Mutagen | Suppliers |
|---|---|---|---|---|---|
| w218Tg | Transgenic Insertion | Unknown | Unknown | DNA_AND_CRISPR | |
| w223Tg | Transgenic Insertion | Unknown | Unknown | DNA_AND_CRISPR |
Sequence Targeting Reagents
| Targeting Reagent | Created Alleles | Publications |
|---|---|---|
| CRISPR1-tnfsf10l3 | 1 |
GENE ONTOLOGY
| Ontology | GO Term |
|---|---|
| Biological Process | immune response (more) |
| Cellular Component | integral component of membrane (more) |
| Molecular Function | metal ion binding (more) |
| Type | Name | Length (nt) | Analysis | |
|---|---|---|---|---|
| mRNA |
tnfsf10l3-201
(1)
|
980 |
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|
| Browsers: UCSC, NCBI, Ensembl, ZFIN |
INTERACTIONS AND PATHWAYS
ANTIBODIES
No data available
PLASMIDS
No data available
CONSTRUCTS WITH SEQUENCES FROM tnfsf10l3
No data available
MARKER RELATIONSHIPS
| tnfsf10l3 Contained in: | [BAC] DKEY-22F5 (1) (order this) |
| tnfsf10l3 Encodes: | [cDNA] MGC:194182 (1), MGC:194197 (1) |
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_001042713 (1) | 870 nt |
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| Genomic | GenBank:BX511168 (1) | 263757 nt | Blast at MegaBLAST |
| Polypeptide | UniProtKB:Q0PKX9 (1) | 289 aa |
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ORTHOLOGY for tnfsf10l3 (
Chr:
21
)
CITATIONS (21)