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ZIRC
ZFIN ID: ZDB-GENE-070412-4
Gene Name: fukutin related protein
Gene Symbol: fkrp
Sequence Ontology ID : SO:0001217

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Previous Name: zgc:162829

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(Including Attributions)
Location: Chr: 15 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in several processes, including muscle fiber development; regulation of protein glycosylation; and vasculogenesis. Predicted to localize to the integral component of membrane. Used to study  ...
GENE EXPRESSION
All Expression Data: 4 figures from 2 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa295 Point Mutation Unknown Premature Stop ENU
uab203 Small Deletion Unknown Unknown TALEN
uab204 Insertion Unknown Unknown TALEN
Targeting reagents:
DISEASE ASSOCIATED WITH fkrp HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
autosomal recessive limb-girdle muscular dystrophy type 2I Muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 5 607155
congenital muscular dystrophy-dystroglycanopathy type A5 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 5 613153
muscular dystrophy-dystroglycanopathy type B5 Muscular dystrophy-dystroglycanopathy (congenital with or without mental retardation), type B, 5 606612
DISEASE ASSOCIATED WITH fkrp VIA EXPERIMENTAL MODELS
Human Disease Fish Conditions Citations
muscular dystrophy AB + MO1-fkrp control Thornhill et al., 2008
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of protein glycosylation (more)
Cellular Component integral component of membrane (more)
Molecular Function molecular_function (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007074 (1)
  • Pfam:PF04991 (1)
  •  Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM fkrp No data available
    MARKER RELATIONSHIPS
    fkrp Contained in: [BAC] CH73-143N15 (1) (order this), DKEY-31C13 (order this)
    fkrp Encodes: [cDNA] MGC:162829 (1) (order this), MGC:193499 (1) (order this), MGC:193535 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001089490 (1) 2197 bp
    Genomic GenBank:BX324136 (1) 255306 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A4QP37 (1) 536 aa
    Sequence Clusters UniGene:11951 (1)
    Sequence Information (all 28)
    ORTHOLOGY for fkrp ( Chr: 15 )
    CITATIONS (24)