ZFIN ID: ZDB-GENE-070410-90
Gene Name: DNA-damage-inducible transcript 3
Gene Symbol: ddit3
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: CHOP (1), zgc:162630

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 26 figures from 25 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20839 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: Fig. 5 from Her et al., 2013
    Observed in:
    DISEASE ASSOCIATED WITH ddit3 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    myxoid liposarcoma Myxoid liposarcoma 613488
    DISEASE ASSOCIATED WITH ddit3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process response to hypoxia (more)
    Cellular Component CHOP-ATF3 complex (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004827 (1)
  • InterPro:IPR016670 (1)
  • PROSITE:PS50217 (1)
  • Pfam:PF07716 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ddit3-001 (1) 1388
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ddit3 No data available
    MARKER RELATIONSHIPS
    ddit3Contained in: [BAC] CH211-125M22 (1) (order this)
    ddit3Encodes: [cDNA] MGC:162630 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001082825 (1) 1415bp
    Genomic GenBank:BX950854 (1) 171896bp
    Select Tool
    Polypeptide UniProtKB:F1Q964 (1) 242aa
    Sequence Clusters UniGene:41190 (1)
    Sequence Information (all 12)
    OTHER ddit3 GENE PAGES
  • Alliance (1)
  • Gene:561924 (1)
  • VEGA:OTTDARG00000027306 (1)
  • Ensembl(GRCz11):ENSDARG00000059836 (2)
  • ORTHOLOGY for ddit3 (Chr: 6)
    CITATIONS (71)