ZFIN ID: ZDB-GENE-070410-73
Gene Name: CFAP20 domain containing
Gene Symbol: cfap20dc    Nomenclature History

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Previous Names: C6H3orf67 (1), zgc:162324

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Localizes to motile cilium. Orthologous to human CFAP20DC (CFAP20 domain containing).
Genome Resources: Alliance (1),  Gene:556322 (1),  Ensembl(GRCz11):ENSDARG00000026086 (1)
GENE EXPRESSION
All Expression Data: Fig. S3 from Choksi et al., 2014
Wild-type Stages, Structures: Segmentation:26+ somites (22.0h-24.0h) to Segmentation:26+ somites (22.0h-24.0h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la029239Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-cfap20dc N/A 1
    DISEASE ASSOCIATED WITH cfap20dc HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cfap20dc VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cilium (more)
    Molecular Function molecular_function (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:162324-202 (1)    Ensembl 2655
    ncRNA zgc:162324-002 (1)    Ensembl 718
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cfap20dc No data available
    MARKER RELATIONSHIPS
    cfap20dc Contained in: [BAC] CH211-139G10 (1), DKEYP-67F1 (1)
    cfap20dc Encodes: [cDNA] MGC:162324 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001110023 (1) 2254 nt
    Genomic GenBank:BX255933 (1) 231623 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1QDR3 (1) 731 aa
    Sequence Information (all 15)
    ORTHOLOGY for cfap20dc ( Chr: 6 )
    CITATIONS (14)