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ZIRC
ZFIN ID: ZDB-GENE-070410-27
Gene Name: SWI5-dependent homologous recombination repair protein 1
Gene Symbol: sfr1
Sequence Ontology ID : SO:0000704

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Previous Names: meir5, zgc:162162

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have nuclear receptor transcription coactivator activity. Predicted to be involved in double-strand break repair via homologous recombination and positive regulation of transcription,  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35484 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sfr1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sfr1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process double-strand break repair via homologous recombination (more)
    Cellular Component nucleus (more)
    Molecular Function nuclear receptor transcription coactivator activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR018468 (1)
  • Pfam:PF10376 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sfr1-201 (1) 1221
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sfr1 No data available
    MARKER RELATIONSHIPS
    sfr1Contained in: [BAC] CH211-223P8 (1) (order this)
    sfr1Encodes: [cDNA] MGC:162162 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001082860 (1) 1116bp
    Genomic GenBank:AL929005 (1) 166364bp
    Select Tool
    Polypeptide UniProtKB:B7ZD04 (1) 201aa
    Sequence Clusters UniGene:84274 (1)
    Sequence Information (all 10)
    ORTHOLOGY for sfr1 (Chr: 13)
    CITATIONS (15)