ZFIN ID: ZDB-GENE-070410-100
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Gene Name: non-SMC condensin II complex, subunit G2
Gene Symbol: ncapg2    Nomenclature History

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Previous Names: id:ibd2775, zgc:162881

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to localize to the nucleus. Is expressed in brain and spinal cord. Orthologous to human NCAPG2 (non-SMC condensin II complex subunit G2).
Genome Resources: Alliance (1),  Gene:100037337 (1),  Ensembl(GRCz11):ENSDARG00000060023 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Kudoh et al., 2001 [ibd2775]
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026064Tg Transgenic Insertion Unknown Unknown DNA
sa2364 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa10405 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
    • sa12675 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa16326 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa18884 Point Mutation Unknown Splice Site ENU
    sa40970 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa40971 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-ncapg2
    		1
    CRISPR2-ncapg2
    		1
    MO1-ncapg2 N/A 1
    PHENOTYPE
    Data: 5 figures from Khan et al., 2019
    Observed in:
    DISEASE ASSOCIATED WITH ncapg2 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Khan-Khan-Katsanis syndrome 618460
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component nucleus (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Homologous_superfamily IPR011989 Armadillo-like helical
    Homologous_superfamily IPR016024 Armadillo-type fold
    Family IPR024741 Condensin-2 complex subunit G2
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ncapg2-201 (1)    Ensembl 4183
    Select Tool
    ncapg2-202 (1)    Ensembl 290
    Select Tool
    Browsers: UCSC,  NCBI,  Ensembl,  ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ncapg2 No data available
    MARKER RELATIONSHIPS
    ncapg2 Contained in: [BAC] CH211-212M22 (1), DKEY-125M8 (1) (order this), DKEY-200K18 (1) (order this)
    ncapg2 Encodes: [EST] ibd2775
    [cDNA] MGC:162881 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001089492 (1) 3723 bp
    Select Tool
    Genomic RefSeq:NW_018394703 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:E7FH61 (1) 1140 aa
    Select Tool
    Sequence Information (all 26)
    ORTHOLOGY for ncapg2 ( Chr: 7 )
    CITATIONS (23)