ZFIN ID: ZDB-GENE-070112-2312
Gene Name: heparan sulfate 2-O-sulfotransferase 1a
Gene Symbol: hs2st1a
Sequence Ontology ID : SO:0000704

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Previous Names: hs2st1, im:7147474, zgc:158230

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7147474]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  brain, head, hindbrain, immature eye (all 10) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11765 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14728 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-hs2st1a (1), MO2-hs2st1a (1)
    PHENOTYPE
    Data: 5 figures from Cadwalader et al., 2012
    Observed in: blastoderm cell, cell migration involved in gastrulation, cell proliferation, cell-cell adhesion (all 10) expand
    DISEASE ASSOCIATED WITH hs2st1a HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process epiboly involved in gastrulation with mouth forming second (more)
    Cellular Component integral component of membrane (more)
    Molecular Function heparan sulfate sulfotransferase activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005331 (1)
  • InterPro:IPR007734 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF03567 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hs2st1a-001 (1) 3940
    ncRNA hs2st1a-002 (1) 867
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM hs2st1a No data available
    MARKER RELATIONSHIPS
    hs2st1aContained in: [BAC] DKEY-43B14 (1) (order this)
    hs2st1aEncodes: [EST] IMAGE:7147474 (1) (order this)
    [cDNA] MGC:158230 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080670 (1) 2025bp
    Genomic GenBank:BX927330 (1) 203149bp Blast at MegaBLAST
    Polypeptide UniProtKB:A1L1P8 (1) 354aa
    Sequence Clusters UniGene:61397 (1)
    Sequence Information (all 12)
    OTHER hs2st1a GENE PAGES
  • Alliance (1)
  • Gene:791188 (1)
  • VEGA:OTTDARG00000023263 (1)
  • Ensembl(GRCz10):ENSDARG00000099478 (1)
  • ORTHOLOGY for hs2st1a (Chr: 2)
    CITATIONS (16)