ZFIN ID: ZDB-GENE-070112-1862
Gene Name: biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
Gene Symbol: bloc1s6
Sequence Ontology ID : SO:0000704

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Previous Names: pldn, zgc:158718 (1)

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
  whole organism
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la020513Tg Transgenic Insertion Unknown Unknown DNA
sa23209 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36559 Point Mutation Unknown Splice Site ENU
    sa43030 Point Mutation Unknown Splice Site ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH bloc1s6 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Hermansky-Pudlak syndrome 9 Hermansky-pudlak syndrome 9 614171
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process intracellular transport (more)
    Cellular Component BLOC-1 complex (more)
    Molecular Function molecular_function (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR017242 (1)
  • InterPro:IPR028119 (1)
  • Pfam:PF14712 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA bloc1s6-001 (1) 870
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM bloc1s6 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    bloc1s6Contained in: [Fosmid] CH1073-404F17 (1) (order this)
    bloc1s6Encodes: [cDNA] MGC:158718 (1) (order this), MGC:191751 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080697 (1) 911bp
    Genomic GenBank:CU595864 (1) 40479bp
    Select Tool
    Polypeptide UniProtKB:E9QGH2 (1) 156aa
    Sequence Clusters UniGene:90416 (1)
    Sequence Information (all 16)
    OTHER bloc1s6 GENE PAGES
  • Gene:791215 (1)
  • VEGA:OTTDARG00000032405 (1)
  • Ensembl(GRCz10):ENSDARG00000042933 (1)
  • ORTHOLOGY for bloc1s6 (Chr: 18)
    CITATIONS (18)