ZFIN ID: ZDB-GENE-061221-1
Gene Name: PR domain containing 11
Gene Symbol: prdm11    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 25 Mapping Details/Browsers
Description: Predicted to have histone methyltransferase activity. Predicted to be involved in regulation of gene expression. Predicted to localize to nucleus. Orthologous to human PRDM11 (PR/SET domain 11).
Genome Resources: Alliance (1),  Gene:565473 (1),  Ensembl(GRCz11):ENSDARG00000074468 (1)
GENE EXPRESSION
All Expression Data: Fig. S6 from Sun et al., 2008
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Blastula:Sphere (4.0h-4.33h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-prdm11 N/A 1
PHENOTYPE No data available
DISEASE ASSOCIATED WITH prdm11 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH prdm11 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of gene expression (more)
Cellular Component nucleus (more)
Molecular Function histone methyltransferase activity (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA prdm11-202 (1)    Ensembl 7715
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM prdm11 No data available
MARKER RELATIONSHIPS
prdm11 Contained in: [BAC] CH211-286C4
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:XM_688756 (1) 4583 nt
Genomic GenBank:BX088562 (1) 138646 nt
Select Tool
Polypeptide UniProtKB:F1R557 (1) 1115 aa
Sequence Information (all 11)
ORTHOLOGY for prdm11 ( Chr: 25 )
CITATIONS (17)