ZFIN ID: ZDB-GENE-061019-3
Gene Name: cadherin 7a
Gene Symbol: cdh7a    Nomenclature History

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Previous Name: cdh7

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Involved in notochord cell differentiation. Predicted to localize to integral component of membrane and plasma membrane. Is expressed in axis; central nervous system; neural keel; neural tube; and notochord. Orthologous to human CDH7 (cadherin 7).
Genome Resources: Alliance (1),  Gene:567704 (1),  Ensembl(GRCz11):ENSDARG00000023542 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13502 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19774 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31281 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32930 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-cdh7a N/A 1
    MO2-cdh7a N/A 1
    DISEASE ASSOCIATED WITH cdh7a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cdh7a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process notochord cell differentiation (more)
    Cellular Component integral component of membrane (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 17)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cdh7a-201 (1)    Ensembl 2364
    ncRNA cdh7-002 (1)    Ensembl 624
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Name Type Isotype Host Organism Assay Source Publications
    Ab1-cdh7 polyclonal Rabbit IHC, WB Covance
    1
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cdh7a No data available
    MARKER RELATIONSHIPS
    cdh7a Contained in: [BAC] DKEY-148A12 (1) (order this)
    cdh7a Encodes: [cDNA] MGC:194646 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001077448 (1) 2364 nt
    Genomic GenBank:BX511023 (1) 244788 nt Blast at MegaBLAST
    Polypeptide UniProtKB:B0S6D4 (1) 787 aa
    Sequence Information (all 15)
    ORTHOLOGY for cdh7a ( Chr: 2 )
    CITATIONS (21)