ZFIN ID: ZDB-GENE-060929-998
Gene Name: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)
Gene Symbol: galnt11    Nomenclature History

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Previous Names: sb:cb921, wu:fc01a10, zgc:153274

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Predicted to have Notch binding activity. Predicted to be involved in regulation of Notch signaling pathway. Predicted to localize to the Golgi apparatus. Is expressed in otic vesicle; pronephric duct; and solid lens vesicle. Orthologous to human GALNT11 (polypeptide N-acetylgalactosaminyltransferase 11).
Genome Resources: Alliance (1),  Gene:558716 (1),  Ensembl(GRCz11):ENSDARG00000063636 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 4 figures (6 images) from Thisse et al., 2001 [cb921]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16956 Point Mutation Unknown Premature Stop ENU
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-galnt11 N/A 1
MO2-galnt11 N/A 1
DISEASE ASSOCIATED WITH galnt11 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH galnt11 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein glycosylation (more)
Cellular Component Golgi apparatus (more)
Molecular Function carbohydrate binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR000772 Ricin B, lectin domain
Domain IPR001173 Glycosyltransferase 2-like
Homologous_superfamily IPR029044 Nucleotide-diphospho-sugar transferases
Homologous_superfamily IPR035992 Ricin B-like lectins
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA galnt11-201 (1)    Ensembl 2396
ncRNA galnt11-002 (1)    Ensembl 453
galnt11-003 (1)    Ensembl 638
galnt11-004 (1)    Ensembl 446
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM galnt11 No data available
MARKER RELATIONSHIPS
galnt11 Contained in: [BAC] CH211-232L14
galnt11 Contains: [STS] chunp30565
galnt11 Encodes: [EST] cb921 (1) (order this), fc01a10
[cDNA] MGC:153274 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001076562 (1) 2404 bp
Genomic GenBank:BX294185 (1) 115427 bp
Select Tool
Polypeptide UniProtKB:F1R7M5 (1) 590 aa
Sequence Information (all 16)
ORTHOLOGY for galnt11 ( Chr: 24 )
CITATIONS (23)