ZFIN ID: ZDB-GENE-060929-998
Gene Name: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)
Gene Symbol: galnt11
Sequence Ontology ID : SO:0000704

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Previous Names: sb:cb921, wu:fc01a10, zgc:153274

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(Including Attributions)
Location: Chr: 24 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have Notch binding activity; predicted to be involved in regulation of Notch signaling pathway; predicted to localize to the Golgi apparatus; orthologous to human GALNT11 (polypeptide  ...
GENE EXPRESSION
Directly Submitted Expression Data: 4 figures (6 images) from Thisse et al., 2001 [cb921]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16956 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH galnt11 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH galnt11 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein glycosylation (more)
    Cellular Component Golgi apparatus (more)
    Molecular Function carbohydrate binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000772 (1)
  • InterPro:IPR001173 (1)
  • InterPro:IPR029044 (1)
  • InterPro:IPR035992 (1)
  • PROSITE:PS50231 (1)
  • Pfam:PF00535 (1)
  • Pfam:PF00652 (1)
  • EC:2.4.1.- (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA galnt11-002 (1) 453
    galnt11-003 (1) 638
    galnt11-004 (1) 446
    mRNA galnt11-201 (1) 2396
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM galnt11 No data available
    MARKER RELATIONSHIPS
    galnt11Contained in: [BAC] CH211-232L14 (order this)
    galnt11Contains: [STS] chunp30565
    galnt11Encodes: [EST] cb921 (1) (order this), fc01a10
    [cDNA] MGC:153274 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001076562 (1) 2404bp
    Genomic GenBank:BX294185 (1) 115427bp
    Select Tool
    Polypeptide UniProtKB:F1R7M5 (1) 590aa
    Sequence Clusters UniGene:77799 (1)
    Sequence Information (all 17)
    OTHER galnt11 GENE PAGES
  • Alliance (1)
  • Gene:558716 (1)
  • VEGA:OTTDARG00000028682 (1)
  • Ensembl(GRCz11):ENSDARG00000063636 (2)
  • ORTHOLOGY for galnt11 (Chr: 24)
    CITATIONS (20)