ZFIN ID: ZDB-GENE-060929-1158
Gene Name: solute carrier family 17 member 5
Gene Symbol: slc17a5    Nomenclature History

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Previous Names: sb:cb809, zgc:153077

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Predicted to have sialic acid transmembrane transporter activity. Predicted to be involved in sialic acid transport. Predicted to localize to integral component of membrane and lysosome. Is expressed in several structures, including axis; cardiovascular system; hatching gland; polster; and yolk syncytial layer. Human ortholog(s) of this gene implicated in sialuria. Orthologous to human SLC17A5 (solute carrier family 17 member 5).
Genome Resources: Alliance (1),  Gene:767760 (1),  Ensembl(GRCz11):ENSDARG00000055190 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (8 images) from Thisse et al., 2001 [cb809]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb262 Indel Unknown Unknown CRISPR
ihb263 Insertion Exon 2 Unknown CRISPR
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
CRISPR1-slc17a5 1
PHENOTYPE No data available
DISEASE ASSOCIATED WITH slc17a5 HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
sialuria Alliance Salla disease 604369
Sialic acid storage disorder, infantile 269920
DISEASE ASSOCIATED WITH slc17a5 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process transmembrane transport (more)
Cellular Component integral component of membrane (more)
Molecular Function transmembrane transporter activity (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA slc17a5-201 (1)    Ensembl 2202
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM slc17a5 No data available
MARKER RELATIONSHIPS
slc17a5 Contained in: [BAC] DKEY-187A12 (1) (order this)
slc17a5 Contains: [STS] chunp30057
slc17a5 Encodes: [EST] cb809 (1) (order this)
[cDNA] MGC:153077 (1), MGC:192696 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001076727 (1) 2184 nt
Genomic GenBank:BX323884 (1) 137509 nt
Select Tool
Polypeptide UniProtKB:F1R043 (1) 489 aa
Sequence Information (all 15)
ORTHOLOGY for slc17a5 ( Chr: 13 )
CITATIONS (21)