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ZIRC
ZFIN ID: ZDB-GENE-060810-50
Gene Name: RAD54 homolog B
Gene Symbol: rad54b
Sequence Ontology ID : SO:0000704

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Previous Names: im:7137737, im:7153525

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA translocase activity. Predicted to be involved in double-strand break repair via homologous recombination and reciprocal meiotic recombination. Predicted to localize to the  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7137737]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7153525]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2853 Point Mutation Unknown Premature Stop ENU
sa42732 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rad54b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    colorectal cancer Colon cancer, somatic 114500
    non-Hodgkin lymphoma Lymphoma, non-Hodgkin, somatic 605027
    DISEASE ASSOCIATED WITH rad54b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process double-strand break repair via homologous recombination (more)
    Cellular Component nucleus (more)
    Molecular Function ATP binding (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rad54b-201 (1) 3229
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rad54b No data available
    MARKER RELATIONSHIPS
    rad54bContained in: [BAC] CH211-79L20 (order this)
    rad54bEncodes: [EST] IMAGE:7137737 (1) (order this), IMAGE:7153525 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_683887 (1) 3289bp
    Genomic GenBank:BX511010 (1) 156317bp
    Select Tool
    Polypeptide UniProtKB:E9QHY4 (1) 917aa
    Sequence Clusters UniGene:16441 (1)
    Sequence Information (all 22)
    ORTHOLOGY for rad54b (Chr: 16)
    CITATIONS (15)