ZFIN ID: ZDB-GENE-060707-1
Gene Name: neuronal pentraxin 2a
Gene Symbol: nptx2a    Nomenclature History

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Previous Names: nptx2, narp (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Involved in regulation of glutamatergic synaptic transmission. Is expressed in nervous system. Orthologous to human NPTX2 (neuronal pentraxin 2).
Genome Resources: Alliance (1),  Gene:553230 (1),  Ensembl(GRCz11):ENSDARG00000037794 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
biu6 Insertion Exon 1 Premature Stop TALEN
sa12556 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    TALEN1-nptx2a 1
    DISEASE ASSOCIATED WITH nptx2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nptx2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of synaptic transmission, glutamatergic (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA nptx2a-202 (1)    Ensembl 2032
    nptx2a-203 (1)    Ensembl 609
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nptx2a
    Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
    Tg(nptx2:GAL4-VP16) nptx2a GAL4VP16 Danio rerio 2 8
    MARKER RELATIONSHIPS
    nptx2a Contained in: [BAC] CH211-151L1 (1)
    nptx2a Encodes: [cDNA] MGC:136687 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001109768 (1) 1934 nt
    Genomic GenBank:CU138531 (1) 150250 nt
    Select Tool
    Polypeptide UniProtKB:Q6DG61 (1) 451 aa
    Sequence Information (all 27)
    ORTHOLOGY for nptx2a ( Chr: 3 )
    CITATIONS (22)