ZFIN Gene: si:ch211-236k19.4

ZFIN ID: ZDB-GENE-060526-122

ZFIN ID: ZDB-GENE-060526-122

Gene Name:

si:ch211-236k19.4

Gene Symbol:

si:ch211-236k19.4

Sequence Ontology ID :

SO:0001217

Previous Name:

Location:

Chr: 5 Mapping Details/Browsers

Nomenclature History

AUTOMATED DESCRIPTION

Predicted to have metal ion binding activity and nucleic acid binding activity. Orthologous to human ZBTB26 (zinc finger and BTB domain containing 26).

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available

MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available

PHENOTYPE No data available

DISEASE ASSOCIATED WITH si:ch211-236k19.4 HUMAN ORTHOLOG No data available

DISEASE ASSOCIATED WITH si:ch211-236k19.4 VIA EXPERIMENTAL MODELS No data available

GENE ONTOLOGY

Ontology	GO Term
Cellular Component	nucleus (more)
Molecular Function	metal ion binding (more)

GO Terms (all 5)

PROTEIN FAMILIES, DOMAINS AND SITES
InterPro:IPR000210 (1) InterPro:IPR011333 (1) InterPro:IPR013087 (1) InterPro:IPR036236 (1)	PROSITE:PS00028 (1) PROSITE:PS50097 (1) PROSITE:PS50157 (1)	Pfam:PF00096 (1) Pfam:PF00651 (1)

TRANSCRIPTS
Type	Name	Length (bp)	Analysis
mRNA	zbtb26-201 (1)	1299	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

GENE PRODUCT DESCRIPTION No description available

INTERACTIONS AND PATHWAYS

ANTIBODIES No data available

PLASMIDS No data available

CONSTRUCTS WITH SEQUENCES FROM si:ch211-236k19.4 No data available

MARKER RELATIONSHIPS

si:ch211-236k19.4 Contained in:	[BAC] CH211-236K19 (1) (order this)
si:ch211-236k19.4 Encodes:	[cDNA] MGC:175153 (1) (order this)

SEQUENCE INFORMATION

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_001122625 (1)	3798 bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX255921 (1)	142918 bp	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:B0JZM7 (1)	412 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
Sequence Clusters	UniGene:86719 (1)

Sequence Information (all 11)

OTHER si:ch211-236k19.4 GENE PAGES

Alliance (1)

Gene:100142649 (1)

VEGA:OTTDARG00000018822 (1)

Ensembl(GRCz11):ENSDARG00000028949 (1)

ORTHOLOGY for si:ch211-236k19.4 ( Chr: 5 )

CITATIONS (12)

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