ZFIN ID: ZDB-GENE-060519-25
Gene Name: phosphodiesterase 12
Gene Symbol: pde12    Nomenclature History

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Previous Names: fc58c05, fi42f03, wu:fc58c05, wu:fi42f03, zgc:136374

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have 3'-5'-exoribonuclease activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay. Predicted to localize to mitochondrion. Orthologous to human PDE12 (phosphodiesterase 12).
Genome Resources: Alliance (1),  Gene:692319 (1),  Ensembl(GRCz11):ENSDARG00000030964 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la017934Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa2595 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pde12 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pde12 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (more)
    Cellular Component mitochondrion (more)
    Molecular Function 3'-5'-exoribonuclease activity (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pde12-201 (1)    Ensembl 2114
    Browsers: UCSCEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pde12 No data available
    MARKER RELATIONSHIPS
    pde12 Contained in: [BAC] CH73-104F13 (1)
    [Fosmid] CH1073-165F9 (1)
    pde12 Encodes: [EST] fc58c05, fi42f03
    [cDNA] MGC:136374 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001045288 (1) 1863 nt
    Genomic GenBank:FP067440 (1) 78501 nt
    Select Tool
    Polypeptide UniProtKB:F1RBC5 (1) 591 aa
    Sequence Information (all 21)
    ORTHOLOGY for pde12 ( Chr: 11 )
    CITATIONS (20)