ZFIN ID: ZDB-GENE-060512-196
Gene Name: cell adhesion molecule 3
Gene Symbol: cadm3    Nomenclature History

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Previous Name: zgc:136589 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to localize to integral component of membrane. Is expressed in alar plate midbrain region; immature eye; nervous system; radial glial cell; and trigeminal placode. Orthologous to human CADM3 (cell adhesion molecule 3).
Genome Resources: Alliance (1),  Gene:692273 (1),  Ensembl(GRCz11):ENSDARG00000057013 (2)
GENE EXPRESSION
All Expression Data: 16 figures from 3 publications
Directly Submitted Expression Data: 6 figures (14 images) from Thisse et al., 2008 [cssl:d0285]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014981Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33009 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa38354 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44546 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cadm3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cadm3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    Molecular Function protein binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cadm3-201 (1)    Ensembl 1775
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Name Type Isotype Host Organism Assay Source Publications
    Ab1-cadm3 polyclonal Rabbit IHC 1
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cadm3 No data available
    MARKER RELATIONSHIPS
    cadm3 Contained in: [BAC] CH73-56L10 (1), CH73-333N16 (1), CH211-195H23 (1), DKEYP-35B8 (1)
    cadm3 Encodes: [EST] cssl:d0285 (1)
    [cDNA] MGC:136589 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001045246 (1) 1490 nt
    Genomic GenBank:CR847981 (1) 197506 nt
    Select Tool
    Polypeptide UniProtKB:B0CLV6 (1) 420 aa
    Sequence Information (all 26)
    ORTHOLOGY for cadm3 ( Chr: 2 )
    CITATIONS (30)