ZFIN ID: ZDB-GENE-060503-871
Gene Name: pre-B-cell leukemia homeobox interacting protein 1a
Gene Symbol: pbxip1a    Nomenclature History

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Previous Names: id:ibd5036, si:ch211-210h11.11 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to be involved in regulation of Rho guanyl-nucleotide exchange factor activity. Predicted to localize to membrane. Is expressed in mesoderm and somite. Orthologous to human PBXIP1 (PBX homeobox interacting protein 1).
Genome Resources: Alliance (1),  Gene:563463 (1),  Ensembl(GRCz11):ENSDARG00000071015 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 3 figures (4 images) from Kudoh et al., 2001 [ibd5036]
Wild-type Stages, Structures: Segmentation:10-13 somites (14.0h-16.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pbxip1a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH pbxip1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of Rho guanyl-nucleotide exchange factor activity (more)
Cellular Component integral component of membrane (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA pbxip1a-202 (1)    Ensembl 3640
pbxip1a-203 (1)    Ensembl 474
pbxip1a-204 (1)    Ensembl 582
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM pbxip1a No data available
MARKER RELATIONSHIPS
pbxip1a Contained in: [BAC] CH211-210H11 (1), DKEY-105N5 (1) (order this)
pbxip1a Encodes: [EST] ibd5036
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:XM_005159476 (1)
Genomic GenBank:BX927401 (1) 137958 nt
Select Tool
Polypeptide UniProtKB:F1RDW1 (1) 751 aa
Sequence Information (all 27)
ORTHOLOGY for pbxip1a ( Chr: 19 )
CITATIONS (19)