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General Information
ZIRC
ZFIN ID: ZDB-GENE-060503-329
Gene Name: CAS1 domain containing 1
Gene Symbol: casd1
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: si:dkey-104m9.2, zgc:136291

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have N-acetylneuraminate 7-O(or 9-O)-acetyltransferase activity. Predicted to be involved in carbohydrate metabolic process. Predicted to localize to the integral component of Golgi  ...
GENE EXPRESSION
All Expression Data: Fig. 4 from Sun et al., 2018
Wild-type Stages, Structures: Gastrula:Shield (6.0h-8.0h) to Gastrula:Shield (6.0h-8.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la020831Tg Transgenic Insertion Unknown Unknown DNA
sa6566 Point Mutation Unknown Splice Site ENU
sa23580 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH casd1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH casd1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process carbohydrate metabolic process (more)
    Cellular Component integral component of Golgi membrane (more)
    Molecular Function N-acetylneuraminate 7-O(or 9-O)-acetyltransferase activity (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR012419 (1)
  • InterPro:IPR036514 (1)
  • Pfam:PF07779 (1)
  • EC:2.3.1.45 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA casd1-202 (1) 2784
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM casd1 No data available
    MARKER RELATIONSHIPS
    casd1 Contained in: [BAC] DKEY-104M9 (1) (order this)
    casd1 Encodes: [cDNA] MGC:136291 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001045242 (1) 2856 bp
    Genomic GenBank:BX640469 (1) 83435 bp
    Select Tool
    Polypeptide UniProtKB:T1ECU5 (1) 806 aa
    Sequence Clusters UniGene:14824 (1)
    Sequence Information (all 14)
    ORTHOLOGY for casd1 ( Chr: 19 )
    CITATIONS (25)