ZFIN ID: ZDB-GENE-060503-197
Gene Name: ATG16 autophagy related 16-like 2 (S. cerevisiae)
Gene Symbol: atg16l2    Nomenclature History

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Previous Name: si:ch211-152c12.1 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Predicted to be involved in autophagosome assembly and negative stranded viral RNA replication. Predicted to localize to the autophagosome membrane. Orthologous to human ATG16L2 (autophagy related 16 like 2).
Genome Resources: Alliance (1), 
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la019479Tg Transgenic Insertion Unknown Unknown DNA
PHENOTYPE No data available
DISEASE ASSOCIATED WITH atg16l2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH atg16l2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process autophagosome assembly (more)
Cellular Component autophagosome membrane (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Conserved_site IPR019775 WD40 repeat, conserved site
Domain IPR013923 Autophagy-related protein 16
Domain IPR017986 WD40-repeat-containing domain
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR036322 WD40-repeat-containing domain superfamily
Repeat IPR001680 WD40 repeat
Repeat IPR020472 G-protein beta WD-40 repeat
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA atg16l2-201 (1)    Ensembl 1007
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM atg16l2 No data available
MARKER RELATIONSHIPS
atg16l2 Contained in: [BAC] CH211-152C12 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
Genomic GenBank:CR388135 (1) 159848 nt
Select Tool
Polypeptide UniProtKB:F1RAF4 (1) 302 aa
Sequence Information (all 4)
ORTHOLOGY for atg16l2 ( Chr: 15 )
CITATIONS (13)