ZFIN ID: ZDB-GENE-050930-1
Gene Name: neuronal calcium sensor 1b
Gene Symbol: ncs1b    Nomenclature History

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Previous Names: ncs-1b (1), fa55b03, freqb, neuronal calcium sensor-1b (1), wu:fa55b03 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Is expressed in diencephalon; hindbrain; peripheral olfactory organ; and telencephalon. Orthologous to human NCS1 (neuronal calcium sensor 1).
Genome Resources: Alliance (1),  Gene:553174 (1),  Ensembl(GRCz11):ENSDARG00000054186 (1)
GENE EXPRESSION
All Expression Data: Fig. 3 from Blasiole et al., 2005
Wild-type Stages, Structures: Pharyngula:Prim-25 (36.0h-42.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa17735 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ncs1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ncs1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function calcium ion binding (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ncs1b-201 (1)    Ensembl 2070
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ncs1b No data available
    MARKER RELATIONSHIPS
    ncs1b Contained in: [BAC] DKEY-164F24 (1) (order this)
    ncs1b Encodes: [EST] fa55b03
    [cDNA] MGC:136323 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001020514 (1) 2082 nt
    Genomic GenBank:BX548021 (1) 202392 nt Blast at MegaBLAST
    Polypeptide UniProtKB:Q53A16 (1) 190 aa
    Sequence Information (all 13)
    ORTHOLOGY for ncs1b ( Chr: 8 )
    CITATIONS (18)