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ZIRC
ZFIN ID: ZDB-GENE-050522-514
Gene Name: katanin p60 (ATPase containing) subunit A 1
Gene Symbol: katna1
Sequence Ontology ID : SO:0001217

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Previous Names: si:dkey-15j16.1, zgc:110580 (1)

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have microtubule-severing ATPase activity. Involved in axon extension and cytoplasmic microtubule organization. Predicted to localize to several cellular components, including the  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110580]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la021476Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa5672 Point Mutation Unknown Premature Stop ENU
    sa18250 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH katna1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH katna1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axon extension (more)
    Cellular Component cytoplasm (more)
    Molecular Function ATP binding (more)
    GO Terms (all 18)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA katna1-201 (1) 2355
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM katna1 No data available
    MARKER RELATIONSHIPS
    katna1 Contained in: [BAC] DKEY-15J16 (1) (order this)
    katna1 Encodes: [cDNA] MGC:110580 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020604 (1) 1895 bp
    Genomic GenBank:BX255904 (1) 228691 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5RII9 (1) 485 aa
    Sequence Clusters UniGene:78566 (1)
    Sequence Information (all 13)
    ORTHOLOGY for katna1 ( Chr: 20 )
    CITATIONS (32)