ZFIN ID: ZDB-GENE-050522-514
Gene Name: katanin p60 (ATPase containing) subunit A 1
Gene Symbol: katna1
Sequence Ontology ID : SO:0000704

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Previous Names: si:dkey-15j16.1, zgc:110580 (1)

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110580]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la021476Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa5672 Point Mutation Unknown Premature Stop ENU
    sa18250 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 5 figures from Butler et al., 2010
    Observed in:
    DISEASE ASSOCIATED WITH katna1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH katna1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axon extension (more)
    Cellular Component cytoplasm (more)
    Molecular Function ATP binding (more)
    GO Terms (all 18)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003593 (1)
  • InterPro:IPR003959 (1)
  • InterPro:IPR003960 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR028596 (1)
  • PROSITE:PS00674 (1)
  • Pfam:PF00004 (1)
  • EC:5.6.1.1 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA katna1-001 (1) 2355
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM katna1 No data available
    MARKER RELATIONSHIPS
    katna1Contained in: [BAC] DKEY-15J16 (1) (order this)
    katna1Encodes: [cDNA] MGC:110580 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020604 (1) 1895bp
    Genomic GenBank:BX255904 (1) 228691bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5RII9 (1) 485aa
    Sequence Clusters UniGene:78566 (1)
    Sequence Information (all 13)
    OTHER katna1 GENE PAGES
  • Alliance (1)
  • Gene:553631 (1)
  • VEGA:OTTDARG00000005411 (1)
  • Ensembl(GRCz11):ENSDARG00000021827 (2)
  • ORTHOLOGY for katna1 (Chr: 20)
    CITATIONS (31)